If you have setup a python environment, you can also download via pip:
pip install --extra-index-url https://projects.h-its.org/pypi multipipsa
for python 2
pip install --extra-index-url https://projects.h-its.org/pypi multipipsa3 for python 3
If you did not yet setup a python environment, download the package on the package server and follow the descriptions in the INSTALL document.
Changes in the version 4.0.2
- Modified pathlength to account for longer pathnames than 40 characters
Changes in the version 3.1 and 3.2 are:
- Added support for cylindrical volumes for comparison
- Fall back to default, when sphere file is empty
Changes in the version 3.0 are:
- Added the program to calculate similarity indices in spherical regions;
- Changed output that has now the values of average potential differences
as well as the average potential values in the comparison region;
- Added the program to correlate and predict kinetic constants, and
added an application example for this program;
- Added a script to remove a protein from a set of compared proteins;
- Added modified version to run the calculations in parallel;
- Changes in documentation.
Changes in the version 2.0 are:
- The programs rewritten to make the parameter usage more transparent -
previous parameter input from the files is changed to the input via
command line;
- Fixed subdirectory hierarchy is replaced via user-defined, e.g.
calculations can be done in any chosen directory;
- Only an upper part of the similarity matrix is calculated, thus the
computations for a set of n protens are done not for
n*n but n*(n+1)/2 pairs;
- Enabled a possibility to add extra proteins to already processed
set of proteins;
- Added phylogenic tree analysis;
- Added APBS electrostatic potential based analysis;
- Added several auxiliary programs.
Version 2.0 and 3.0 was developed at EML Research gGmbH, Heidelberg, Germany.
Version 1.0 was developed at EMBL, Heidelberg, Germany.
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