Pdba database

PDBA database

PDBA database holds annotated PQS entries.

This is version 6, updated January 4, 2007 using January 3, 2007, release of PQS
It has 34166 PQS entries, annotated using version 51.3 of UniProtKB/Swiss-Prot , version 20.2 of Prosite and Dec 30, 2006 version of PDB/SwissProt Cross reference from IMB Jena Image Library Project
Only the first macromolecule from PQS is used for related PDB entry
For PDB entries of virus samples *.unique PQS files are used (that contains just those symmetry generated repeats that together describe all possible inter-chain contacts)
(1015) PQS entries having no aminoacids in them are not annotated

Availability of annotations for PQS entries (abundant is for ProSite patterns with a high probability of occurrence and "ProSite non-abundant feature" is for structures having no SwissProt annotations, but having at least one ProSite non-abundant feature) :

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