The advanced pathway layout algorithm compared to handmade examples

Graphic program Original Becker et al. algorithm Advanced layout algorithm

PO-Reaction

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TCA

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Summary of the reactions catalyzed by the pyruvate dehydrogenase complex. (L refers to the lipoyl group.)

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Conversions of one-carbon units attached to tetrahydrofolate.

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Glycolysis:

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Citric acid cycle overview:

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The urea cycle, the citric acid cycle, and the transamination of oxalacetate are linked by fumarate and aspartate:

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Katja Wegner


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